• Home
  • Pipelines
  • Resources
    • Components
    • Modules
    • Subworkflows

    • Configs
    • Shared configs

    • Plugins & Actions
    • nft-utils
    • setup-nextflow
    • setup-nf-test
  • Docs
  • Community
    • What's happening
    • Advisories
    • Blog

    • Events
    • Bytesize Talks
    • Hackathons
    • Training
    • Talks
    • Weekly Helpdesks

    • Programs and groups
    • Special interest groups
    • In-progress RFCs
    • Mentorships
    • Contributors
    • Shop new
    • Connect game 👾
  • About
    • About nf-core
    • Stickers
    • Governance
    • Marketing
    • Code of conduct

    • Publications
    • Statistics

    • Join nf-core
    • Select theme
    • Light
    • Dark
    • System
    • Select theme
    • Light
    • Dark
    • System
    Join nf-core Join nf-core

nf-core/tumourevo
Edit

Analysis pipeline to model tumour clonal evolution from WGS data (driver annotation, quality control of copy number calls, subclonal and mutational signature deconvolution)

cancer-evolutioncancer-genomicscopy-number-variationmutational-signaturespopulation-geneticsquality-controlsubclonal-deconvolutionvariant-annotation
This is the development version of the pipeline.
Launch development version https://github.com/nf-core/tumourevo
  • Introduction
  • Usage
  • Parameters
  • Output
    • dev
Introduction Usage Parameters Output
  • dev
run with
See the docs on how to configure the Seqera Platform CLI.
  • nf-core
  • Nextflow
  • Seqera Platform
subscribers
9
stars
20
open issues
5
open PRs
2
last release
not yet released
last update
1 day ago
included modules
bcftools_mpileupbcftools_viewcnaqcctreeensemblvep_download and 9 more modules
included subworkflows
utils_nfcore_pipelineutils_nfschema_plugin
contributors
Github user valerianilucrezia
Github user kdavydzenka
Github user nicola-calonaci
Github user elena-buscaroli
Github user giorgiagandolfi
Github user tucano
Github user vvvirgy
Github user RaqManzano
Github user RodTol
Github user brandon-hastings
get help
Ask a question on Slack Open an issue on GitHub

See the source code for this page

Making awesome workflows since 2018.

Supported by:

+ + +
See the source code for this website on GitHub:
https://github.com/nf-core/website